Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799535.1_cds_XP_016465512.1_5789
CDS Infomation

[gene=LOC107788339] [db_xref=GeneID:107788339] [protein=2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal-like isoform X2] [protein_id=XP_016465512.1] [location=complement(join(7298..7427,7558..7772,7987..8366,8664..8791,9138..9331,9419..9516,9930..10028,10122..10293))] [gbkey=CDS]
Sequence

ATGCAGAGCTTGGAAGAAGCAAGAACAGCTCTTCAGGTAGCAAAGCCAACAATGTTGGTC
CACGATGCAACCTGTAATTTCTGGAAGTTCGAGTCCTATGATGATTCTGTACCTTCTCTG
AGGTGGCAAGTGCTAATGGATAATCCTAGTGTAGTTAATAGCACTAAGCTTGGATTAACT
ACTAAACAGCTTAAAAGAAGTTTCAAAAGGCATTTAGTTGCAGACTACCTGTGGGCACCT
CAGGAAGCTGCTATAATATGCTTTACCTCAGGAACCACCGGGCGGCCAAAGGGAGTTACC
ATAAGCCATTCAGCTTTGGTGGTGCAATCCCTTGCAAAAATTGCAATTGTTGGTTATGGT
GAGGATGATGTCTATTTACACACTGCACCATTGTGCCACATTGGTGGTATATCATCAGCC
TTGGCCTTGTTAATGGCAGGAGGTTGTCATATTCTACTACCAAAGTTTGAAGCTAAATTG
GCTATTGAATCCATAGAGCAGCATAATGTTACTTCTTTTATCACAGTTCCAGCTATGATG
TCTGATGTAATCTCTTTTTATAGGACAAAGCACACATCTGTAGGGTCCAAATCTGTGAGG
AAGGTTCTTAATGGAGCTGGGGGTCTTTCATCAGATCTTATCAAAAATGCGATTGAGATT
TTCCCGAGGGCTAAAATTCTTTCAGCCTATGGAATGACCGAGGCATGTTCTTCTCTAACT
TTCATGACTCTTTATGACCCGACGAAAGAGAGTTGTGTCCAGAATTCTTGTGCCAATAGC
TCCAATTTGTCACATAAACCAGATGGTATCTGTGTTGGAAAGCCTGCTCCACATATTGAA
ATATGGATTGCTGGGGATGATTCATCTTGTATAGGGAGGATTTTGACACGAGGACCCCAT
GTAATGCTTGGATACTGGGGTCAAATGCCAAGCAAGAATTCTTCTCCAACTGATGAATGT
TGGCTTGACACTGGTGATATAGGACATATAGATGATTGTGGAAATGTCTGGCTCATTGGG
CGTTTGAAAGGTCGAATAAAGAGTGGGGGCGAGAATGTTTATCCGGAAGAGGTGGAAGCT
GTCTTATCCCAACATCCAGGGATATCTGCTAGTGTTGTTATTGGGCTTCCCGACTCTCGC
TTGACCGAGATGGTCATTGCCTGTATTAGGCTCAAAGACAATTGGCAGTGGACTGATTCC
AGTTCTAATCATCCGGTTAACAAGAAGGAGCATTATCTGTCCAGCACTCTCCTCCAGAAC
TTCTGTAGAGCGAAAGATTTGACGGGGTTCAAAATACCCAAGAATTTTGTATTGTGGAAA
AATCAATTTCCAGTGACAACAACAGGGAAATTAAGAAGAGATCAAGTCAGAGCAGAACTT
ATGTCTTATAGGCAGTTACAGCCCAGCAGACTATGA

Peptide Sequence

PEP ID

XP_016465512.1
PEP Infomation

PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal-like isoform X2 [Nicotiana tabacum]
Sequence

MQSLEEARTALQVAKPTMLVHDATCNFWKFESYDDSVPSLRWQVLMDNPSVVNSTKLGLT
TKQLKRSFKRHLVADYLWAPQEAAIICFTSGTTGRPKGVTISHSALVVQSLAKIAIVGYG
EDDVYLHTAPLCHIGGISSALALLMAGGCHILLPKFEAKLAIESIEQHNVTSFITVPAMM
SDVISFYRTKHTSVGSKSVRKVLNGAGGLSSDLIKNAIEIFPRAKILSAYGMTEACSSLT
FMTLYDPTKESCVQNSCANSSNLSHKPDGICVGKPAPHIEIWIAGDDSSCIGRILTRGPH
VMLGYWGQMPSKNSSPTDECWLDTGDIGHIDDCGNVWLIGRLKGRIKSGGENVYPEEVEA
VLSQHPGISASVVIGLPDSRLTEMVIACIRLKDNWQWTDSSSNHPVNKKEHYLSSTLLQN
FCRAKDLTGFKIPKNFVLWKNQFPVTTTGKLRRDQVRAELMSYRQLQPSRL

Transcript Sequence

Gene sequence data has not been registered.